top

Gadvasu

Guru Angad Dev Veterinary And Animal Sciences University
ਗੁਰੂ ਅੰਗਦ ਦੇਵ ਵੈਟਨਰੀ ਐਂਡ ਐਨੀਮਲ ਸਾਇੰਸਜ਼ ਯੂਨੀਵਰਸਿਟੀ

You are viewing:       404 Not Found   

College of Animal Biotechnology

Faculty Detail

Dr. Chandra Sekhar Mukhopadhay

Designation: Senior Scientist
Contact Address:Department of Bioinformatics, College of Animal Biotechnology, Guru Angad Dev Veterinary and Animal Sciences University, Ludhiana-141004
Telephone :
Mobile: 9779541452
Email: csmbioinfo@gmail.com, csmukhopadhyay@gadvasu.in

Academic Credentials

  • B.V.Sc. & A.H. (WBUAFS, Kolkata): 2002
  • M.V.Sc. (Animal Genetics & Breeding, ICAR-NDRI, Karnal): 2004
  • Ph.D. (Animal Genetics & Breeding, ICAR-NDRI, Karnal): 2008
  • MSc (Information Technology) (PTU, Distance Education): 2013
  • One year online certificate masters course on Artificial Intelligence (from Simplilearn): 2020

Teaching and Other Appointments

Teaching: Bioinformatics, Animal Genomics, Genetics
Training: Periodically organize online and offline trainings on Bioinformatics

Other Appointments

  • In charge, Viral Research and Diagnostic Laboratory (COVID19 Diagnostics Lab, GADVASU, Ludhiana) (21st October 2020 till date)
  • Program Officer of National Service Scheme (NSS) wing of the B. Tech. (Biotechnology) students of the College of Animal Biotechnology, GADVASU, Ludhiana (2017 onward).
  • Member Secretary, Project Monitoring and Evaluation Cell, College of Animal Biotechnology
  • Member, Disciplinary Committee of the College of Animal Biotechnology, GADVASU, Ludhiana
  • Nominee, Director of Research for Purchase
  • Nominee, Dean PGS  for verification of Program of Work of PG Students.
  • Member, Anti Ragging Committee
  • Member, Research Review Committee

Area of Research Interests

  • Bioinformatics
  • Artificial Intelligence
  • Genomics and Transcriptomics


Ongoing Projects

SN

Name/ No of Project/ Scheme

Funding Agency

Period

From   To

Total Funding

Scientists involved

(PI/ Co-PI)

1.                   

Parentage determination and cytogenetic profiling in dogs. “DBT-GADVASU Canine Research Centre and Network.”

DBT, New Delhi

2019-2021

Rs 39.7 lacs

PI

2.                   

TLR-Ligands: To Design Novel Vaccines Adjuvants Against New Castle Disease in Indigenous Chicken

DBT, New Delhi

2014-2018

26 Lacs

CC-PI

3.                   

Construction of miRNA library associated with Disease Resistance in Buffalo

SERB-DST

2012-2015

20.77 Lacs

PI

4.                   

Institutional Development Plan for Improved Learning Outcome, Skill and Entrepreneurship at GADVASU

ICAR (World Bank Funded)

2019-2022

35 Crore

Member/Co-PI

5.                   

Molecular characterization of canine distemper virus field isolates for selection of suitable vaccine candidate(s)

 

DBT, Govt. Of India

2018-2021

30 Lacs

Co-PI

6.                   

Characterization of Fecundity Gene in Assam Hill Goat

DBT, Govt. Of India

2017-2020

26.79 Lacs

Co-PI

7.                   

Identification of tag SNPs associated with New Castle disease susceptibility/ resistance in commercial broiler vis-a-vis Aseel Chicken of Punjab

2017-2020

RKVY, Govt of India

30 Lacs

PI

8.                   

Genetic profiling of Sahiwal and Holstein Friesian crossbred cattle for genes impacting stress tolerance and climate change

2013-16

 

RKVY, Govt of India

30 Lacs

PI

  • Best Researcher Award (for the College of Animal Biotechnology) of the Year 2018-19 given away by Guru Angad Dev Veterinary and Animal Sciences University on 29th may 2019
  • “Fulbright-Nehru Academic and Professional Excellence Fellowships” (FNAPE: Research-2016-17), an international educational exchange program sponsored by the USA Government, for conducting research at Iowa State University, USA, for 9 months (August 2016 to May 2017)
  • Punjab Farmers Commission funded Advanced Foreign Training on “Marker Assisted Selection and Functional Genomics” for 6 months (2011 to 2012) ate Iowa State University, USA

No. of Publications

Research: 50

Extension: 7

Books: 02

Manuals: 05


Publications

  • G Kaur, R Verma, CS Mukhopadhyay, R Sethi. 2022. Elevated pulmonary levels of Axin2 in mice exposed to herbicide 2, 4?D with or without endotoxin. Journal of Biochemical and Molecular Toxicology 35 (12): e22912 (IF: 3.652)
  • D Deka, NN Barman, N Deka, BK Batth, G Singh, S Singh, RK Agrawal, CS Mukhopadhyay. 2021. Sero-epidemiology of porcine parvovirus, circovirus, and classical swine fever virus infections in India. Tropical Animal Health and Production 53 (1): 1-12 (IF: 1.559)
  • Dhanoa JK, Singh J, Singh A, Arora JS, Sethi RS and Mukhopadhyay CS*. 2019. Discovery of isomiRs in PBMCs of diseased vis-à-vis healthy Indian water buffaloes. ExRNA. 1:12 https://doi.org/10.1186/s41544-019-0013-1 (IF: UC)
  • J Singh, JK Dhanoa, RK Choudhary, A Singh, RS Sethi, S Kaur, Mukhopadhyay CS*. 2020. MicroRNA expression profiling in PBMCs of Indian water Buffalo (Bubalus bubalis) infected with Brucella and Johne’s disease. ExRNA. 2: 1-13 https://exrna.biomedcentral.com/articles/10.1186/s41544-020-00049-y (IF: UC)
  • J Singh, Mukhopadhyay CS*, JS Arora, S Kaur. 2015. Biocomputational Characterization and Evolutionary Analysis of Bubaline Dicer1 Enzyme. Asian Austr. J. Anim. Sci., 28(6): 876-887. doi: http://dx.doi.org/10.5713/ajas.14.0767 (IF: 2.509)
  • Kaur S, Mukhopadhyay CS, Arora JS and Sethi RS. 2016. Indoxacarb interaction alters immunotoxic and genotoxic potential of endotoxin. J Pesticide Sci., 41(3): 65-70. DOI http://doi.org/10.1584/jpestics.D16-012 (IF: 1.519)
  • Manku HK, Dhanoa JK, Kaur S, Arora JS, Mukhopadhyay CS*. 2017. Biocomputational identification and validation of novel microRNAs predicted from bubaline whole genome shotgun sequences. Comput. Biol. Chem. 70: 96-106. doi: 10.1016/j.compbiolchem.2017.08.005 (IF: 2.877)
  • Singh J, Mukhopadhyay CS*, Kaur S, Malhotra P, Sethi RS, Choudhary RK. 2016. Identification of the MicroRNA Repertoire in TLR-Ligand Challenged Bubaline PBMCs as a Model of Bacterial and Viral Infection. PLoS One. (eISSN 1932-6203) 11(6): e0156598. doi: 10.1371/journal.pone.0156598. (IF: 3.24)


Invited Lectures:
More than 30 in various Institutions in India

Review Articles:

  • JK Dhanoa, R Verma, RS Sethi, JS Arora, Mukhopadhyay CS*. 2019. Biogenesis and biological implications of isomiRs in mammals- a review. ExRNA. 1: 3. https://doi.org/10.1186/s41544-018-0003-8 (IF: UC)
  • JK Dhanoa, RS Sethi, R Verma, JS Arora, Mukhopadhyay CS*. 2018. Long non-coding RNA: its evolutionary relics and biological implications in mammals: a review. Journal of Animal Science and Technology 60 (1): 25 (IF: 1.95)
  • Dhanoa JK, Mukhopadhyay CS*, Arora JS. 2016. Y-chromosomal genes affecting male fertility: A review. Vet World. 9(7):783-91. doi: 10.14202/vetworld.2016.783-791. (IF: 2.11)


Authored/Edited Books:

  • Mukhopadhyay CS, RK Choudhary, MA Iquebal. 2017. Basic Applied Bioinformatics-A Beginners Guide for Students. John Wiley & Sons Limited; USA. ISBN: 9781119244332
  • Bioinformatic approaches for livestock genome analysis. 2015. Eds. U. Singh, S. Kumar, Mukhopadhyay CS, R. Deb, R. R. Alyethodi, R. Alex, K. Dhama, and I Ganguly. Satish Serial Publishing House, Delhi, India, ISBN: 9789384053017.